PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU00930.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 222aa MW: 24935.6 Da PI: 4.6364 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.2 | 7.4e-17 | 43 | 92 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++ + +Wv+e+r+pse +kr++lg++ tae+Aa+a++ a+++l+g PHU00930.1 43 IYRGVRRRN-NDKWVCEVREPSE---QKRIWLGSYLTAEMAARAHDVAALALRG 92 69****887.8*********976...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MNNSSSCSSV RMEASDEESF LLASSKPKKN AGRKKFKETR HPIYRGVRRR NNDKWVCEVR 60 EPSEQKRIWL GSYLTAEMAA RAHDVAALAL RGQLATLNFA DSAWLLQVPV SNDPKELRQA 120 AARAAEAFGP RGNSNVNVDV DIGDEEMKEV EPQDNVVDNY NVVVEENGSN VMHSSSCGIE 180 EWQANMEQGC MFSPNPCLYG NHFSWDEDVE SDVEVSLWNY SL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12610.1 | 9e-42 | ERF family protein |