PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU00854.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | GRAS | ||||||||
Protein Properties | Length: 93aa MW: 10075.7 Da PI: 8.9128 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 35.8 | 1.2e-11 | 22 | 86 | 136 | 199 |
GRAS 136 pegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpg 199 p+gpp++RiTg +++ s + ++ + +rL+++ +++++pfef++ va +++++e+++L+v+p+ PHU00854.1 22 PGGPPRIRITGTDDSISAyaRGGGIKIVDRRLSSVIASCNIPFEFHP-VAASCSNVEIKHLNVRPD 86 489***********877788999************************.7999***********997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 93 aa Download sequence |
MMEIMHRGDL KEVLIVCAKP GPGGPPRIRI TGTDDSISAY ARGGGIKIVD RRLSSVIASC 60 NIPFEFHPVA ASCSNVEIKH LNVRPDSRFA PYA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17230.1 | 8e-13 | GRAS family protein |