PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU00831.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

CAMTA

Protein Properties

Length: 1103aa MW: 123269 Da PI: 5.903

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU00831.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	178.7	7.1e-56	20	136	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100 l+ ++rwl++ e+++iL n++k++++ e+++rp+sgsl+L++rk++ryfrkDG+sw+kkkdgktv+E+he+LK g+++vl+cyYah+een++fqrr+yw PHU00831.1 20 LEAQHRWLRPAEVCEILRNYQKFRIAPEPPNRPPSGSLFLFDRKVLRYFRKDGHSWRKKKDGKTVKEAHERLKAGSIDVLHCYYAHGEENENFQRRSYW 118 5679********************************************************************************************* PP CG-1 101 lLeeelekivlvhylevk 118 +L ee+++ivlvhy+evk PHU00831.1 119 MLVEEMSHIVLVHYREVK 136 *************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1103 aa Download sequence
MAESRRYGLN AQLDIEQILL EAQHRWLRPA EVCEILRNYQ KFRIAPEPPN RPPSGSLFLF 60 DRKVLRYFRK DGHSWRKKKD GKTVKEAHER LKAGSIDVLH CYYAHGEENE NFQRRSYWML 120 VEEMSHIVLV HYREVKGNRT NFSRIKEPQQ VTPDFQETDE DVRSSEVDSS ASTKFYPNDY 180 QVNSQVTDTT SLSSVQASEY EDAESVYNQH PTSGFHSFLD AQPSAGDGLA VPYRPIPFSN 240 DHQVQFAGSS GMNFSSIPPG NRNGNTANSY IPSRNLDFPS WETLSVNSPA AFESLHFQSS 300 GQPGANNLMH EQGNTTMGEM FLNDFKRQEK ENRIDGLGNW QTSEGASSFI PKWSMDQKLN 360 PDLASGHRSS GVYGVEHHNS LEASQVLPAQ QDKHPTHNEL QSQLSDANAG GSSLNADLDH 420 NLIIGVKTDY SALKQPLLDG VLKREGLKKL DSFDRWISRE LEDVSESHMQ QSNSSSYWDN 480 VGDEDGVDNS TIASQVQLDT YILSPSLAQD QFFSIIDFSP NWAFVGSEIK VLITGKFLKS 540 QQEVENCSWA CMFGELEVPA EVIADGVLRC HTPVQKAGRV PFYITCSNRL ACSEVREFDF 600 RVTEGQDVDV ANPNTCSSSE SLLHMRFGKL LSLESNASQT SPPISGDDVS HMSSKINSLL 660 KEDDNEWEEM LHLTNENNFM AEKVKDQLLQ KLLKEKLRVW LLQKVAEGGK GPNILDEGGQ 720 GVLHFAAALG YDWAILPTIA AGVSVNFRDV NGWTALHWAA SYGRERTVVF LISLDAAAGA 780 LTDPTPKHPS GRTPADLASS NGHKGIAGYL AESNLSSHLS SLELKEKKQG ENVQALGEAV 840 QTVSERTATP AWDGDWPHGV SLKDSLAAVR NATQAAARIH QVFRVQSFQR KQLKEYGGSE 900 FGLSDECALS LLTMKTSRAG QHDEPVHAAA VRIQNKFRSW KGRRDFLLIR QRIIKIQAHV 960 RGHQVRNKYK NIIWSVGILE KVILRWRRKG SGLRGFKPEA PTEASNSQVQ PAQADDYDFL 1020 KEGRKQTEER LQKALARVKS MVQYPEARDQ YRRLLNVVSD MQEPNSASDG APSNNSVEAA 1080 DFGDDLIDLD DLLDDDTVMP TAP

Sequence ? help Back to Top

Protein Sequence Length: 1103 aa Download sequence

MAESRRYGLN AQLDIEQILL EAQHRWLRPA EVCEILRNYQ KFRIAPEPPN RPPSGSLFLF  60
DRKVLRYFRK DGHSWRKKKD GKTVKEAHER LKAGSIDVLH CYYAHGEENE NFQRRSYWML  120
VEEMSHIVLV HYREVKGNRT NFSRIKEPQQ VTPDFQETDE DVRSSEVDSS ASTKFYPNDY  180
QVNSQVTDTT SLSSVQASEY EDAESVYNQH PTSGFHSFLD AQPSAGDGLA VPYRPIPFSN  240
DHQVQFAGSS GMNFSSIPPG NRNGNTANSY IPSRNLDFPS WETLSVNSPA AFESLHFQSS  300
GQPGANNLMH EQGNTTMGEM FLNDFKRQEK ENRIDGLGNW QTSEGASSFI PKWSMDQKLN  360
PDLASGHRSS GVYGVEHHNS LEASQVLPAQ QDKHPTHNEL QSQLSDANAG GSSLNADLDH  420
NLIIGVKTDY SALKQPLLDG VLKREGLKKL DSFDRWISRE LEDVSESHMQ QSNSSSYWDN  480
VGDEDGVDNS TIASQVQLDT YILSPSLAQD QFFSIIDFSP NWAFVGSEIK VLITGKFLKS  540
QQEVENCSWA CMFGELEVPA EVIADGVLRC HTPVQKAGRV PFYITCSNRL ACSEVREFDF  600
RVTEGQDVDV ANPNTCSSSE SLLHMRFGKL LSLESNASQT SPPISGDDVS HMSSKINSLL  660
KEDDNEWEEM LHLTNENNFM AEKVKDQLLQ KLLKEKLRVW LLQKVAEGGK GPNILDEGGQ  720
GVLHFAAALG YDWAILPTIA AGVSVNFRDV NGWTALHWAA SYGRERTVVF LISLDAAAGA  780
LTDPTPKHPS GRTPADLASS NGHKGIAGYL AESNLSSHLS SLELKEKKQG ENVQALGEAV  840
QTVSERTATP AWDGDWPHGV SLKDSLAAVR NATQAAARIH QVFRVQSFQR KQLKEYGGSE  900
FGLSDECALS LLTMKTSRAG QHDEPVHAAA VRIQNKFRSW KGRRDFLLIR QRIIKIQAHV  960
RGHQVRNKYK NIIWSVGILE KVILRWRRKG SGLRGFKPEA PTEASNSQVQ PAQADDYDFL  1020
KEGRKQTEER LQKALARVKS MVQYPEARDQ YRRLLNVVSD MQEPNSASDG APSNNSVEAA  1080
DFGDDLIDLD DLLDDDTVMP TAP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein