PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU00802.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB_related | ||||||||
Protein Properties | Length: 242aa MW: 27021.9 Da PI: 9.2249 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.7 | 5.5e-18 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqkyl 48 +g+WT+eEd++l++ +k++G g+W++ ++++ ++R++k+c++rw +yl PHU00802.1 14 KGPWTPEEDQKLINHIKKHGHGSWRALPNKLAgLNRCGKSCRLRWTNYL 62 79*********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MGRSPSCDET GLKKGPWTPE EDQKLINHIK KHGHGSWRAL PNKLAGLNRC GKSCRLRWTN 60 YLRPDIKRGK FTQDEQKTIL SLHAILGNNL PHLIALANLK ELVEHHHSSW EGQQAAIAIR 120 SLQTEVATLQ YLHLLLQTPN MPANNTTISA NIPEIEAYNN LLNSMKADQI IIGNNSLNNI 180 IPPPNSTSLQ DSIPFSHLPE LQASSSFHLS TSLHKKEIIK TPTTIYYFTM AASFFSGSCC 240 NK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34670.1 | 4e-54 | MYB family protein |