PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU00730.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 186aa MW: 21479.7 Da PI: 7.6526

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU00730.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.5	3.6e-30	107	165	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYG+K+vk+s++pr+YY+C+ gC+vkk+ver++ed ++v++ Yeg Hnhe PHU00730.1 107 LDDGYKWRKYGKKMVKNSPNPRNYYKCSNGGCNVKKRVERDNEDSSYVITAYEGIHNHE 165 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 186 aa Download sequence
MENFSYNYSN PNPNNGDIYS SNFIDTPENF ELSSYYLFPE DGLSDEFLSQ NEFVQSASDS 60 RGSYSNIKPA PTTTHHNMQV KCTKGVMKKV DAKSRVAFRF RSELEVLDDG YKWRKYGKKM 120 VKNSPNPRNY YKCSNGGCNV KKRVERDNED SSYVITAYEG IHNHESPHVI HYTQFPPNNI 180 ALHNLH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26170.1	3e-38	WRKY family protein