PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU00360.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 195aa MW: 22262.9 Da PI: 4.6805 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.9 | 1.7e-20 | 61 | 110 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrd s+++ + r++lg+f+taeeAa a+++a+ +l+g PHU00360.1 61 YRGVRRRP-WGKYAAEIRD-STRN-SVRVWLGTFDTAEEAALAYDQAAYALHG 110 9*******.**********.3433.6*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MDSSSFSSYS YSQYHHLGFN ENDTEDMLLL NVLSEAGENS SNNLHVDQEI NEGSLKEVAS 60 YRGVRRRPWG KYAAEIRDST RNSVRVWLGT FDTAEEAALA YDQAAYALHG TMAVLNYPME 120 IVYRSLMEME CRFEEGCSPV LALKKWHSRM KKTNKKKEQK EMSFENVLVL EDLGADYLEE 180 ILRLSEGCCD PSISC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 9e-45 | ERF family protein |