PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU00241.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 292aa    MW: 33733.2 Da    PI: 9.084
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU00241.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM67.92.8e-2131282128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiyk.vePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kg 97 
                   G+rFhPtdeel+ +yLk+ v +  l+  ++ik +d+++ +ePw++    + +ek  yf s+ ++ +++ k+ +r++ +g+ k + + +++ +   k+
  PHU00241.1   3 SLGYRFHPTDEELI-NYLKNFVLHGVLPPRDFIKVADLFEdLEPWEIM---TDSEKTGYFLSRLKRFKNSTKKFSRTVGKGTCKGQNSGNPIEDGlkKN 97 
                 57************.9**********999999****998626*****6...4567788*********9999*****************99*99877688 PP

         NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                 +++g k++L + + ++++ ++ +W+m+ey l
  PHU00241.1  98 TTIGYKRSLKYKSDNEKDENNDKWLMKEYFL 128
                 88**********9999999**********76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MLSLGYRFHP TDEELINYLK NFVLHGVLPP RDFIKVADLF EDLEPWEIMT DSEKTGYFLS  60
RLKRFKNSTK KFSRTVGKGT CKGQNSGNPI EDGLKKNTTI GYKRSLKYKS DNEKDENNDK  120
WLMKEYFLPD EYFRKSNKNY AFVICKIKEK KKNEKKNKGV VNDDVMEEEV DEFIDYVLES  180
IPDNHQVITN GISTVNPASF MKTHNYFYGE KMDEAETVKL RGTSMFTSFG AANGTTSYQQ  240
HINQQKSVLN STMSMNRSFR ATNGMNELSV KSLLLKSHDV HHQQSVLLAF TS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39820.11e-15NAC family protein