PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT99913.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Dof
Protein Properties Length: 370aa    MW: 40510.2 Da    PI: 7.1972
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT99913.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.92.6e-392483362
      zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                e al+cprCds ntkfCyynnyslsqPr+fCk+CrryWtkGGalrnvP+Ggg+rknkk +
  PHT99913.1 24 EPALNCPRCDSPNTKFCYYNNYSLSQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKIK 83
                6789*****************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    
MTSQDNKDDS QSSGGGPAGA RPKEPALNCP RCDSPNTKFC YYNNYSLSQP RHFCKTCRRY  60
WTKGGALRNV PIGGGCRKNK KIKTCSSSSR DSKDTTSGSS DIGGLKFFHG LSPAMDFQLG  120
GLNFPRLNNT STSTGGSIFN QFSTFGDIST TTTNCATNIG SSSCFNLDPS GSCSGSLLGF  180
NNFPFSSSML KQGTTGVQEM GSMGVHHGTM ASSIESLSSI NQDLHWKLQQ QRLAMLFGGE  240
NQKENNIVSS SIPFDDQNQN QNQNQNQIQI QKPQPILFQN LEISSSKQQE DHHHQEATTF  300
GNNNINSRKD VNITIGSHGN NLATEWFFDD SFGVNPNSTN TINENEDQNG NNWNSTIQAW  360
NNLNQYSTLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65590.17e-57Dof family protein