PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT99763.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 114aa MW: 13010.7 Da PI: 9.5719 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63 | 6.5e-20 | 22 | 73 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y GVr ++ +g++++eIrd + ng +r++l++f+taeeAa a+++a+ +++g+ PHT99763.1 22 HYIGVRKRP-WGKYASEIRDSTRNG--RRVWLETFDTAEEAALAYDQAAFCMRGP 73 799******.**********44465..**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 114 aa Download sequence |
SLSKLKLNHD QDSIISKELE KHYIGVRKRP WGKYASEIRD STRNGRRVWL ETFDTAEEAA 60 LAYDQAAFCM RGPSTCLNFS SLTNMEFNND FKDGLLLSPA AAIKDRHKKR NSTS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 1e-24 | ERF family protein |