PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT99398.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 640aa MW: 69603.8 Da PI: 6.9111

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT99398.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.7	1.6e-30	365	423	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ PHT99398.1 365 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILITTYEGTHNHP 423 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 640 aa Download sequence
MAKGSGLSFD PDPIKHFLPI PTVLNSFLEP HHHQQQEFPH NKFLFKIEPL SSSMESSTFK 60 NRSPPSTIQF PVNLNCSTTA IHHDHQEEEE EHNNRPVIDE MDFFADKKNG NNSEEADVTT 120 TTNNTINHSD RKDSNTPPPE LDFNINTGLH LLTANTYSDQ SIVDDGLSPN SEDKRTKSEL 180 AVLRAELERM NGENRRLRDM LNQATSNYST LQMHMMTMMQ QQQQQNQENG QRDGKSTREE 240 VKQQHHSHNS HGGGGGQMVP RQFMDLGLAA AGATGSEAEE ASQSSSEGRS GREKSRSPMN 300 NMESRSTCGI GREDSPEKGS PGWGPNKIPR LGNASTNKPA DQATEATMRK ARVSVRARSE 360 APMITDGCQW RKYGQKMAKG NPCPRAYYRC TMAAGCPVRK QVQRCAEDRT ILITTYEGTH 420 NHPLPPAAMA MASTTSSAAR MLLSGSMPSA DGLMNSNFFA RTLLPCSSSM ATISASAPFP 480 TVTLDLTQSP NPLQFPRPPN QFQVPFSNPP HTNILANPAA LLPQIFGQAL YNQSKFSGLQ 540 LSQDLEGQQH PSTMSSSIHP SNHNPLADTV NALTNDPNFT AALAAAITSL IGNPGQSNNG 600 TNNTPATTTT ANNNNGSVTS NGNNSNNGNN KVANSGFPAN

Sequence ? help Back to Top

Protein Sequence Length: 640 aa Download sequence

MAKGSGLSFD PDPIKHFLPI PTVLNSFLEP HHHQQQEFPH NKFLFKIEPL SSSMESSTFK  60
NRSPPSTIQF PVNLNCSTTA IHHDHQEEEE EHNNRPVIDE MDFFADKKNG NNSEEADVTT  120
TTNNTINHSD RKDSNTPPPE LDFNINTGLH LLTANTYSDQ SIVDDGLSPN SEDKRTKSEL  180
AVLRAELERM NGENRRLRDM LNQATSNYST LQMHMMTMMQ QQQQQNQENG QRDGKSTREE  240
VKQQHHSHNS HGGGGGQMVP RQFMDLGLAA AGATGSEAEE ASQSSSEGRS GREKSRSPMN  300
NMESRSTCGI GREDSPEKGS PGWGPNKIPR LGNASTNKPA DQATEATMRK ARVSVRARSE  360
APMITDGCQW RKYGQKMAKG NPCPRAYYRC TMAAGCPVRK QVQRCAEDRT ILITTYEGTH  420
NHPLPPAAMA MASTTSSAAR MLLSGSMPSA DGLMNSNFFA RTLLPCSSSM ATISASAPFP  480
TVTLDLTQSP NPLQFPRPPN QFQVPFSNPP HTNILANPAA LLPQIFGQAL YNQSKFSGLQ  540
LSQDLEGQQH PSTMSSSIHP SNHNPLADTV NALTNDPNFT AALAAAITSL IGNPGQSNNG  600
TNNTPATTTT ANNNNGSVTS NGNNSNNGNN KVANSGFPAN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-112	WRKY family protein