PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHT99321.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | GRAS | ||||||||
Protein Properties | Length: 89aa MW: 9638.16 Da PI: 8.505 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 38.8 | 1.4e-12 | 19 | 82 | 138 | 200 |
GRAS 138 gppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgE 200 ++p++RiTg +++ s+ + +e +g+rL ++A++++vpfef++ va +++d+e+++L+v+pg PHT99321.1 19 KTPRVRITGTDDSISSyaRGGGIEIVGRRLLSVAASCNVPFEFHL-VAASCSDVEIKHLNVRPGS 82 68**********877788999***********************9.799************9975 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 89 aa Download sequence |
MMEIMSRGDL KEVLIACAKT PRVRITGTDD SISSYARGGG IEIVGRRLLS VAASCNVPFE 60 FHLVAASCSD VEIKHLNVRP GSRFAPYAQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G50600.1 | 2e-19 | GRAS family protein |