PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT99247.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C3H
Protein Properties Length: 703aa    MW: 80019.4 Da    PI: 7.0864
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT99247.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH25.91.7e-08137158426
                 ---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                 ++C+ff++ G+C+ Gd C F+H 
  PHT99247.1 137 VPCKFFQQ-GICRNGDYCAFMHA 158
                 79******.*************5 PP

Sequence ? help Back to Top
Protein Sequence    Length: 703 aa     Download sequence    
MDGLMPPPPP PPPPSTAVPA QAMGVEMAVE MVGLSAEEEE AVVKGKTDCV YFLASPFTCK  60
KGSECEYRHS DMARLNPRDC RYWLNGNCLN PTCAYRHPPL DGLSEARVPT AMGYSIAPMM  120
PVAPMLQVPY ALSKQSVPCK FFQQGICRNG DYCAFMHAPS FFPNKPAQPP VSTASSDTST  180
VKKVFGGVEK SMEVKELSDI NAPTPVELPK PTRKLEIHLN KKVNTFDEKV LPPNRQHSEY  240
KPTSIPPTSG NPFRVPNRMQ RPIGIDDHRS MQYKGDGISR EPSPGFDVLV DDELKGSDYY  300
HDEDLYGGTR ENVRRNEYEK GDSGDYDSVE DIERNMYRDV RGYDRIQNRH ALEQLIASSE  360
IKPGGSAHLE RRRYGRVDNP ERVQRSDVRH RLSRHRRDND LKSVIDHDFS REKHFEDRTE  420
KSSRRDVHYL PSHENSLSGR FRGRIKLPVR SSSLADRGEL WLDREMDKGR DRGRLTSERL  480
RLDREMDRGR DRGRLISERP QLYSYQGRPR DGIKGRLQED LNNDSSNNRV PRRRRDEIND  540
NKSDFLRPKS LAEVKGRRTA KSNEQQPLRK RKFQKLDSTE DLSFEGPMPL KEILKRKRGG  600
GGGMPSGGSE HDQRERKERT SMTAGNVNFP SVFTKNLSDL PIQNLENELQ ADEEKMVVEG  660
AGGLGDEPVE GEDYNFDEGD PDDEFSDEDD DEFARKLGVV PRK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1569597RKRKFQKLDSTEDLSFEGPMPLKEILKRK