PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT99247.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | C3H | ||||||||
Protein Properties | Length: 703aa MW: 80019.4 Da PI: 7.0864 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 25.9 | 1.7e-08 | 137 | 158 | 4 | 26 |
---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHg 26 ++C+ff++ G+C+ Gd C F+H PHT99247.1 137 VPCKFFQQ-GICRNGDYCAFMHA 158 79******.*************5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 703 aa Download sequence |
MDGLMPPPPP PPPPSTAVPA QAMGVEMAVE MVGLSAEEEE AVVKGKTDCV YFLASPFTCK 60 KGSECEYRHS DMARLNPRDC RYWLNGNCLN PTCAYRHPPL DGLSEARVPT AMGYSIAPMM 120 PVAPMLQVPY ALSKQSVPCK FFQQGICRNG DYCAFMHAPS FFPNKPAQPP VSTASSDTST 180 VKKVFGGVEK SMEVKELSDI NAPTPVELPK PTRKLEIHLN KKVNTFDEKV LPPNRQHSEY 240 KPTSIPPTSG NPFRVPNRMQ RPIGIDDHRS MQYKGDGISR EPSPGFDVLV DDELKGSDYY 300 HDEDLYGGTR ENVRRNEYEK GDSGDYDSVE DIERNMYRDV RGYDRIQNRH ALEQLIASSE 360 IKPGGSAHLE RRRYGRVDNP ERVQRSDVRH RLSRHRRDND LKSVIDHDFS REKHFEDRTE 420 KSSRRDVHYL PSHENSLSGR FRGRIKLPVR SSSLADRGEL WLDREMDKGR DRGRLTSERL 480 RLDREMDRGR DRGRLISERP QLYSYQGRPR DGIKGRLQED LNNDSSNNRV PRRRRDEIND 540 NKSDFLRPKS LAEVKGRRTA KSNEQQPLRK RKFQKLDSTE DLSFEGPMPL KEILKRKRGG 600 GGGMPSGGSE HDQRERKERT SMTAGNVNFP SVFTKNLSDL PIQNLENELQ ADEEKMVVEG 660 AGGLGDEPVE GEDYNFDEGD PDDEFSDEDD DEFARKLGVV PRK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 569 | 597 | RKRKFQKLDSTEDLSFEGPMPLKEILKRK |