PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT99221.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TCP

Protein Properties

Length: 270aa MW: 27869.8 Da PI: 8.5193

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT99221.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	122.6	4.5e-38	29	116	2	90
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgka 90 +++k + +++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++a+++ s s +s++ss +a PHT99221.1 29 TVRKPPAKDRHSKVDGRGRRIRMPIVCAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTIPANFSaV--SVSLRSSHNSSVSA 116 679******************************************************************88842..33333332222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence
MSTSLDQNGT VSPAGAGTSN NDSSTTTLTV RKPPAKDRHS KVDGRGRRIR MPIVCAARVF 60 QLTRELGHKS DGQTIEWLLR QAEPSIIAAT GTGTIPANFS AVSVSLRSSH NSSVSASVDN 120 NKSFVHPLIC GPPSPVSSPA PFLLGKRLRA EEEEGGGGGG GEKDGDNVNV NNVVGHTASF 180 WSVPVPVRHD YGQFWSFGAG AAASGAMPSR FFQQQMEEAA SVSGGGSDGG GRIGNYFPIA 240 QGHLNLLATL SGSGSGSGPC SSGRRVDDGH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	5e-48	TCP family protein