PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT99113.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

E2F/DP

Protein Properties

Length: 470aa MW: 51462.6 Da PI: 4.6324

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT99113.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	86.3	2.2e-27	149	214	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+g+++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg PHT99113.1 149 RYDSSLGLLTKKFINLIKHAEDGMLDLNQAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 214 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MSDSAAAPPS VQSSSAGVKG RNQICEPMKR YLPFGCMKAP FVGNEDYHRF CTPGVVDSSR 60 IDSLKPDAIV VKSPALKRKT GYIKEVESSI CTANSGYADV ANSPLGTPVS GKGGRAHGQS 120 RATKSNKSGP PTPAFNAGSP SPLTPASCRY DSSLGLLTKK FINLIKHAED GMLDLNQAAD 180 TLEVQKRRIY DITNVLEGIG LIEKKLKNRI QWKGVDASKP GGVDNDAAIL KANIDSLSME 240 ERRLDERIRE MQEKLRDMSE DENNQRWLFV TEDDIKSLPC FQNETLIAVK APHGTTLEVP 300 DPDEAVDYPQ RRYRIILRST MGPIDVYLVS QFEEKFEEMN GFEPSTTIPD ASSSGSKDYP 360 AVEISTVSNN VTENEGQTQN VDQLSSDVGT SQDYGGGMMK ILPSDVDDAA DYLFLSDPNV 420 SMTDMWKNDS TVWDGESLLR DFEIDDLASP RPHTPSSNAD VPAPMNIPPR

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MSDSAAAPPS VQSSSAGVKG RNQICEPMKR YLPFGCMKAP FVGNEDYHRF CTPGVVDSSR  60
IDSLKPDAIV VKSPALKRKT GYIKEVESSI CTANSGYADV ANSPLGTPVS GKGGRAHGQS  120
RATKSNKSGP PTPAFNAGSP SPLTPASCRY DSSLGLLTKK FINLIKHAED GMLDLNQAAD  180
TLEVQKRRIY DITNVLEGIG LIEKKLKNRI QWKGVDASKP GGVDNDAAIL KANIDSLSME  240
ERRLDERIRE MQEKLRDMSE DENNQRWLFV TEDDIKSLPC FQNETLIAVK APHGTTLEVP  300
DPDEAVDYPQ RRYRIILRST MGPIDVYLVS QFEEKFEEMN GFEPSTTIPD ASSSGSKDYP  360
AVEISTVSNN VTENEGQTQN VDQLSSDVGT SQDYGGGMMK ILPSDVDDAA DYLFLSDPNV  420
SMTDMWKNDS TVWDGESLLR DFEIDDLASP RPHTPSSNAD VPAPMNIPPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-151	E2F/DP family protein