PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT98828.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 89aa    MW: 10375.8 Da    PI: 9.5412
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT98828.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.68e-10347345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     +WT+   +++ +a +++  +   +W+ Iar++g g+++ +++ ++ 
       PHT98828.1  3 SWTARQNKKFEEALALYDRDtpdRWHNIARCVG-GKSAAEVRRHYE 47
                     6*****************99*************.**********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    
MASWTARQNK KFEEALALYD RDTPDRWHNI ARCVGGKSAA EVRRHYELLV TDIMQIENGQ  60
VPLPNYKATE NNNRGYANEL RLLKNMKLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.23e-37MYB_related family protein