PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT98820.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB_related | ||||||||
Protein Properties | Length: 102aa MW: 11400.6 Da PI: 7.7691 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 32.5 | 1.9e-10 | 6 | 52 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 W+ + +l+ +a + + ++ +W++ a+ +g g+t++++ks++ k+ PHT98820.1 6 TWSNQQNKLFENALAIYDTDtpdRWRKLAKAVG-GKTEEEVKSHYEKL 52 7********************************.***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 102 aa Download sequence |
MATNSTWSNQ QNKLFENALA IYDTDTPDRW RKLAKAVGGK TEEEVKSHYE KLVEDIKHIE 60 SGNVPLPNYN NGGGGGGGGR SNNGNNIIMD HEQQRLKYLK LQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75250.1 | 6e-29 | MYB_related family protein |