PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT98664.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 340aa    MW: 35676.3 Da    PI: 6.7383
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT98664.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA48.61.1e-15251286134
        GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34 
                 C++Cg ++  Tp++Rrgp g+++LCnaCGl+++ kg
  PHT98664.1 251 CRHCGISSksTPMMRRGPAGPRSLCNACGLKWANKG 286
                 *****99999**********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MAEANRRANM YGRETMNAAS LHHQQTQIDD DDDDGAVDAG AGVGAGGSGG GGGGIESMDN  60
PTSHIRYEQH HHSHSHAPLH NGGGGAMEAA GMNGVEGVSH NALYGPPSEI VPTAGSGASD  120
QLTLSFQGEV YVFDSVSPEK VQAVLLLLGG YEVPAGIPTV NVAPQSQRAS GDFPGRLNQP  180
QRAASLNRFR EKRKERCFDK KIRYTVRKEV AMRMQRKKGQ FTSAKSISDE AGSSSADWND  240
GSGQEEQETS CRHCGISSKS TPMMRRGPAG PRSLCNACGL KWANKGILRD LSKVPAPGAQ  300
DQAAKSGEQS NGEPSGSDAM ATAAAMITPS GESTLVTAER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.27e-86GATA family protein