PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT98566.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 498aa MW: 55440.3 Da PI: 6.5447

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT98566.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	90.5	1.4e-28	233	293	1	59
---SS-EEEEEEE--TT-S.S-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgse.fprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kgs+ +pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ PHT98566.1 233 MNDGCQWRKYGQKIAKGSPnCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 293 58*************9736*****99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MENNNKSESD NEMEIDLRLK LDAREEENEE NKIGEPSQLT EKTQEKDQEI PKNDQELSML 60 EKEMKRMKEE NKVLRMAVEQ TMKDYYDLQA KFSTIHQNNH KDHKNFLSLS GNDDSTTSEG 120 LTTRVPKILD IINTTNRTSS PTSHEDDTMD GDQLGLSLTL VSSNSTTSSK LLEMLEEDQR 180 KEKKEDHPTI THQIQNNKSQ NLGGLTSHNV TTASPPNRKS RVSVRARCES ATMNDGCQWR 240 KYGQKIAKGS PNCPRAYYRC TVAPGCPVRK QVQRCLEDMS ILITTYEGTH NHPLPVGATA 300 MASTASAAAS FMLVDSSISP LLNNPNSSLN QPLNFPNYHH NLAPNYHHNI PNSSSSSSLI 360 PYNLSMIRNN ILNSSDPNSQ GNIVLDLTKN ISNNHQFPFA SSSSNSHEMG HSNWMPKLPN 420 YEGNSLLAGL KLQGEHHYSH NNHNIPPTLA HDENMSAIAA DPKFRVAVAA AISSLINKDQ 480 SHSTGESNCG SINRHTDS

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MENNNKSESD NEMEIDLRLK LDAREEENEE NKIGEPSQLT EKTQEKDQEI PKNDQELSML  60
EKEMKRMKEE NKVLRMAVEQ TMKDYYDLQA KFSTIHQNNH KDHKNFLSLS GNDDSTTSEG  120
LTTRVPKILD IINTTNRTSS PTSHEDDTMD GDQLGLSLTL VSSNSTTSSK LLEMLEEDQR  180
KEKKEDHPTI THQIQNNKSQ NLGGLTSHNV TTASPPNRKS RVSVRARCES ATMNDGCQWR  240
KYGQKIAKGS PNCPRAYYRC TVAPGCPVRK QVQRCLEDMS ILITTYEGTH NHPLPVGATA  300
MASTASAAAS FMLVDSSISP LLNNPNSSLN QPLNFPNYHH NLAPNYHHNI PNSSSSSSLI  360
PYNLSMIRNN ILNSSDPNSQ GNIVLDLTKN ISNNHQFPFA SSSSNSHEMG HSNWMPKLPN  420
YEGNSLLAGL KLQGEHHYSH NNHNIPPTLA HDENMSAIAA DPKFRVAVAA AISSLINKDQ  480
SHSTGESNCG SINRHTDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	2e-58	WRKY family protein