PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT98499.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 281aa    MW: 30629.2 Da    PI: 9.8777
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT98499.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.41.4e-12100144347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+ E++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
       PHT98499.1 100 PWTEGEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 144
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MTITYGHSSF ISAGELPPAD VSGGEIMLFG VRVKLDPMRK SVSLNNLSQY EQPNSNDNNN  60
SNGGNTNDSS SKVADEGYAS ADDAVPHHSG SGRERKRGVP WTEGEHKLFL LGLQKVGKGD  120
WRGISRNFVK TRTPTQVASH AQKYFLRRTN LNRRRRRSSL FDITTDSVSV LPTEEAKNLQ  180
EAHVETSKIN AFQVTSVPIK FAPLVLPAQM DKPIESPIQS YNASSIYLRP VPVVVPVSNQ  240
SSAIESSSLS LTLSLSSPSS SSTRYQVMSN FSNGESIISV A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.22e-55MYB_related family protein