PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT98474.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 105aa    MW: 11937.6 Da    PI: 8.4309
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT98474.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.70.000483231030
                HHHHHHHHHHHHHHHCTSCCC CS
         HLH 10 rrRRdriNsafeeLrellPka 30
                rrRR+   s +++L ++lP+ 
  PHT98474.1  3 RRRRSGSSSEIQKLAKILPTY 23
                9******************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 105 aa     Download sequence    
MSRRRRSGSS SEIQKLAKIL PTYLDMSGFL DQKVHTDWST IEAYRNKVSN PFDVQYVEAI  60
AQQTIGSLDC SLFVAAYVEY LSDGLQVPND GLDVRLLRKR YAAFL