PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT98141.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 199aa MW: 22953.8 Da PI: 5.4453 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.7 | 3.3e-19 | 63 | 113 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr ++ +g+++AeIrd + ng r++lg+f++aeeAa a+++a+ +++g PHT98141.1 63 NYRGVRKRP-WGKFAAEIRDSTRNG--VRVWLGTFDSAEEAALAYDQAAFAMRG 113 59*******.**********44465..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MDYSWDELLF HHNSLPFNVN DTEDMLLFNF VAEGGSSTTN SCSSSGIKEE EVTSYEEPEK 60 EKNYRGVRKR PWGKFAAEIR DSTRNGVRVW LGTFDSAEEA ALAYDQAAFA MRGSMAILNF 120 PIEIVKETLN EMKCRFDEGC SPVMELKKRH SMRRKTASRS RRIRARKDHE SSKNVVVFED 180 LGAEYLEELL MSSERITNW |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 161 | 168 | RRIRARKD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 4e-55 | ERF family protein |