PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT98051.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

CAMTA

Protein Properties

Length: 1049aa MW: 118232 Da PI: 5.4933

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT98051.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	178.7	7e-56	20	136	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100 +e ++rwl++ ei++iL n++k++lt e++ rp sgs++L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+++vl+cyYah+ee+ +fqrr+yw PHT98051.1 20 SEvQHRWLRPAEICEILRNYRKFHLTPEAPYRPVSGSVFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEEDDNFQRRSYW 118 5559********************************************************************************************* PP CG-1 101 lLeeelekivlvhylevk 118 +Le++l +iv+vhylevk PHT98051.1 119 MLEQDLMHIVFVHYLEVK 136 *************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1049 aa Download sequence
MADCGSDPSG FRLDITQILS EVQHRWLRPA EICEILRNYR KFHLTPEAPY RPVSGSVFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSIDVLH CYYAHGEEDD NFQRRSYWML 120 EQDLMHIVFV HYLEVKGNKV NVGYIRSVKS AHSNYQNECS LSDSMPTGHK KLASANADSA 180 SLASTLTEAH EEAESEDNHH ACSRFHSYPD RASGMDSHLV ESRDTICSSY GSPQSSVEYT 240 SLPSIDGAGK CDLGNFASGP QRTVDLGYGL PVSQHCSNGE MVCQDDFKNN LSVHENWQCS 300 FGDSPLQFHG QNVNQDLIAD LSYGLGNSFQ NRSLPSDLLS VRVQSYLYPD AQEGQLTQLD 360 LQYLNSLLEV QGDVNQESNM DMIELGDYST VKQPQLSSVK MEEGLKKVDS FSRWVAKELE 420 DVEELHMQPN NRISWNAIDT EEDGSYLPNR LHMDSDSLNP SLSQEQVFSI IDFSPNWAYS 480 NFETKVLITG RFLKSEGELV EYKWSCMFGE VEVPAEVLAD GVLRCHAPPH KPGVLPFYVT 540 CSNRLACSEV REFEYRFGPF QEFGAANVSN TEMHLLERIE NLLSLGPVSN CRISDTMEAA 600 KDKQSTVNKI IFMMEEENQQ MIERASDYDT SQCRVKEDLF LESKLKQNFY AWLIHQVTDD 660 GRGRTLLDDE GQGILHLVAA LGYDWALKPI LASGVSVDFR DINGWTALHW AAFYGREKTV 720 VGLVSLGASP GALTDPSAEF PLARTPADLA SANGHKGISG FLAESSLTTH LTKLTVSDAK 780 EELASEGCEA KVGETVTERV AVTTTGNDVP DVLSLKDSLA AIRNATQAAA RIHQIFRVQS 840 FQRKQIIEHS DDELSSDENA LSILASKSCK LGQNNGIAHA AAIQIQKKFR GWNKRKEFLL 900 IRQKIVKIQA HIRGHQVRKK YKPIIWSVGI LEKVILRWRR KRSGLRGFKS EEVMNKPSTQ 960 DDSLPEDDYD FLKEGRKQTE VRMQKALARV KSMTQYPEGR AQYRRLLTAA EGLREVKQDG 1020 PTQIPEIPED TVYPEEELFD VDSLLDDVE

Sequence ? help Back to Top

Protein Sequence Length: 1049 aa Download sequence

MADCGSDPSG FRLDITQILS EVQHRWLRPA EICEILRNYR KFHLTPEAPY RPVSGSVFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSIDVLH CYYAHGEEDD NFQRRSYWML  120
EQDLMHIVFV HYLEVKGNKV NVGYIRSVKS AHSNYQNECS LSDSMPTGHK KLASANADSA  180
SLASTLTEAH EEAESEDNHH ACSRFHSYPD RASGMDSHLV ESRDTICSSY GSPQSSVEYT  240
SLPSIDGAGK CDLGNFASGP QRTVDLGYGL PVSQHCSNGE MVCQDDFKNN LSVHENWQCS  300
FGDSPLQFHG QNVNQDLIAD LSYGLGNSFQ NRSLPSDLLS VRVQSYLYPD AQEGQLTQLD  360
LQYLNSLLEV QGDVNQESNM DMIELGDYST VKQPQLSSVK MEEGLKKVDS FSRWVAKELE  420
DVEELHMQPN NRISWNAIDT EEDGSYLPNR LHMDSDSLNP SLSQEQVFSI IDFSPNWAYS  480
NFETKVLITG RFLKSEGELV EYKWSCMFGE VEVPAEVLAD GVLRCHAPPH KPGVLPFYVT  540
CSNRLACSEV REFEYRFGPF QEFGAANVSN TEMHLLERIE NLLSLGPVSN CRISDTMEAA  600
KDKQSTVNKI IFMMEEENQQ MIERASDYDT SQCRVKEDLF LESKLKQNFY AWLIHQVTDD  660
GRGRTLLDDE GQGILHLVAA LGYDWALKPI LASGVSVDFR DINGWTALHW AAFYGREKTV  720
VGLVSLGASP GALTDPSAEF PLARTPADLA SANGHKGISG FLAESSLTTH LTKLTVSDAK  780
EELASEGCEA KVGETVTERV AVTTTGNDVP DVLSLKDSLA AIRNATQAAA RIHQIFRVQS  840
FQRKQIIEHS DDELSSDENA LSILASKSCK LGQNNGIAHA AAIQIQKKFR GWNKRKEFLL  900
IRQKIVKIQA HIRGHQVRKK YKPIIWSVGI LEKVILRWRR KRSGLRGFKS EEVMNKPSTQ  960
DDSLPEDDYD FLKEGRKQTE VRMQKALARV KSMTQYPEGR AQYRRLLTAA EGLREVKQDG  1020
PTQIPEIPED TVYPEEELFD VDSLLDDVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein