PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT97951.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Dof

Protein Properties

Length: 482aa MW: 52533.6 Da PI: 6.1473

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT97951.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	116.3	1.3e-36	130	188	2	60
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 ++k+l+cprC+s++tkfCyynn +++qPr+fC++C+ryWt+GG++rn+PvG+grrknk+ PHT97951.1 130 PDKILPCPRCNSSDTKFCYYNNNNVNQPRHFCRSCQRYWTAGGTMRNLPVGAGRRKNKN 188 7899*****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MTCDSEIKLF GKILPVVVSV ECAVAGGTSS GGDGDRCLED GKASSADEGS ENENQGADKD 60 DLTGELNEAK FEEGDQSQMM EESENPRTLS ESENSSKSPT DEDSQAVKTS GTENEPTNVT 120 NSEQNSLKKP DKILPCPRCN SSDTKFCYYN NNNVNQPRHF CRSCQRYWTA GGTMRNLPVG 180 AGRRKNKNLA AHYRHISISE GLLAAGIESP NGLIHHPMFK PNGTILSFGT DLPLCESMAS 240 PLSQAEKRLS NGIQNGFQKA ELKNSSCKVG DTGDECYKGS NIPTPNVMVE EGKRELHKAV 300 MHNINGIPSP FPCLHGVPWP FTWNAAVPMP AICPIPFPMP FFPTPYWNCN VPPWSNPWLG 360 PALQAANEKT SGSDPTSPLG KHSREGDLLK PSNPRGKEQS EQKYSERSIL VPKTLRIDDP 420 DEAAKSSIWS TLGIKYDSAN RGEFFKALQP KSDDKHNKAN TPPVLHANPA ALSRSITFQQ 480 SA

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MTCDSEIKLF GKILPVVVSV ECAVAGGTSS GGDGDRCLED GKASSADEGS ENENQGADKD  60
DLTGELNEAK FEEGDQSQMM EESENPRTLS ESENSSKSPT DEDSQAVKTS GTENEPTNVT  120
NSEQNSLKKP DKILPCPRCN SSDTKFCYYN NNNVNQPRHF CRSCQRYWTA GGTMRNLPVG  180
AGRRKNKNLA AHYRHISISE GLLAAGIESP NGLIHHPMFK PNGTILSFGT DLPLCESMAS  240
PLSQAEKRLS NGIQNGFQKA ELKNSSCKVG DTGDECYKGS NIPTPNVMVE EGKRELHKAV  300
MHNINGIPSP FPCLHGVPWP FTWNAAVPMP AICPIPFPMP FFPTPYWNCN VPPWSNPWLG  360
PALQAANEKT SGSDPTSPLG KHSREGDLLK PSNPRGKEQS EQKYSERSIL VPKTLRIDDP  420
DEAAKSSIWS TLGIKYDSAN RGEFFKALQP KSDDKHNKAN TPPVLHANPA ALSRSITFQQ  480
SA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	5e-86	Dof family protein