PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT97460.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ZF-HD | ||||||||
Protein Properties | Length: 125aa MW: 14115.2 Da PI: 9.0531 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 64.7 | 1.7e-20 | 14 | 65 | 3 | 55 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRr 55 ++Y Clk hA + G avDGC+Ef++s g++gt++a Ca CgC R FHR PHT97460.1 14 VIKYGVCLKSHATKFGHFAVDGCREFVKS-GDDGTKEAYICANCGCIRGFHRI 65 689*************************9.999*******************5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 125 aa Download sequence |
MTSNSSSNSI DKMVIKYGVC LKSHATKFGH FAVDGCREFV KSGDDGTKEA YICANCGCIR 60 GFHRINNPLL HHYQAIKFRF LHNGVIPQGE NVSISRPFMR EIFFTRTPQV SFPNSLPDLI 120 RDPVH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14440.1 | 3e-16 | ZF-HD family protein |