PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT97391.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | C2H2 | ||||||||
Protein Properties | Length: 404aa MW: 44540.9 Da PI: 8.9814 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.8 | 1.9e-05 | 71 | 93 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H PHT97391.1 71 FICEVCNKGFQREQNLQLHRRGH 93 89*******************88 PP | |||||||
2 | zf-C2H2 | 15.2 | 6e-05 | 148 | 170 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H++t+ PHT97391.1 148 WKCDKCSKKYAVQSDWKAHLKTC 170 58*******************98 PP | |||||||
3 | zf-C2H2 | 10.6 | 0.0018 | 178 | 196 | 5 | 23 |
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg+ Fsr++++++H + PHT97391.1 178 DCGTIFSRRDSFVTHRAFC 196 8**************8765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 404 aa Download sequence |
MSNLSYGNSS TEEADETPNV LSSTTSDGSS VHQEQPLPSP NKRRRKLPGN PDPSAEVIAL 60 SPKTLMATNR FICEVCNKGF QREQNLQLHR RGHNLPWKLK QKTSNHEIKK RVYICPESSC 120 VHHDPARALG DLTGIKKHFS RKHGEKKWKC DKCSKKYAVQ SDWKAHLKTC GTKEYKCDCG 180 TIFSRRDSFV THRAFCDALA EENNKVNQVL ASTTQPAATS TGSTQLGPEL ISNTSMLNLL 240 QISNPNIKVP PTSLSNMAGS MFSSSSGYGQ LGTNSSNMSS ATALLQQAAQ MGATVSSNMN 300 SSINVARKSY RSPFNGMQIP IISDHDQIQP QIGNTSVHGF AGSMLQNSSS NNDSLTLDFL 360 GIGGMRQRNL HEIIQQQQQQ EMSFEQQKEV GQQSIQGMNS MWDD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50700.1 | 3e-99 | C2H2 family protein |