PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT97307.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 92aa    MW: 10797.1 Da    PI: 9.7957
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT97307.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding331.4e-10448344
                     SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrw 44
                     +WTt   +++ +a  ++ ++     W+ Iar++g g++ ++++ ++
       PHT97307.1  4 NWTTKQNKKFEEALVMYDKDnngeKWHNIARHVG-GKSVEEVRRHY 48
                     8*********************************.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MATNWTTKQN KKFEEALVMY DKDNNGEKWH NIARHVGGKS VEEVRRHYDL LLRDITQIEN  60
GQVPLPNYRN ASESNARGYA NEQRLLKNLK LQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.23e-31MYB_related family protein