PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT97242.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 357aa MW: 41395.5 Da PI: 6.1414

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT97242.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	77.2	3.8e-24	91	216	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiyk.vePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98 +G+rFhPtdeel+ +yLk+ v + l+ ++ik +d+++ +ePw++ + +eek yf s+ ++ +++ k+ +r++ +g+Wk + + +++ + k++ PHT97242.1 91 KGYRFHPTDEELI-NYLKNFVLHGVLPPRDFIKVADLFEdLEPWEIM--AGSEEKTRYFLSRLKRFKNSTKKFSRTVGKGTWKGQNSGNPIEDGlkKNT 186 7**********.9******999999998626*6..55677899******99******************98776888 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 ++g k++L + + ++++ ++ +W+m+ey l PHT97242.1 187 TIGYKRSLKYKSDNEKDENNDKWLMKEYFL 216 8******9999999********76 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MVSETRTKRC IASSSLARST WLRLRLGVDD INLFGQNLFE TWEEIQSENP KKKCNSFTPP 60 LTGMLLHAET MLKAAWKRHN SSSKRHTISK KGYRFHPTDE ELINYLKNFV LHGVLPPRDF 120 IKVADLFEDL EPWEIMAGSE EKTRYFLSRL KRFKNSTKKF SRTVGKGTWK GQNSGNPIED 180 GLKKNTTIGY KRSLKYKSDN EKDENNDKWL MKEYFLPDEY FRKSNKNYAF VICKIKEKKK 240 NEKKNKGVVN DDVMEEEVDE FIDYVLESIP DNHQVITNGD DNRFAVANEV NYEVMRTNYE 300 ASTSTLHEDY GGEGRSNYLE GGGVEDFNGI NHLLLGVEDI NDENCCIDYD ELLEIIG

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MVSETRTKRC IASSSLARST WLRLRLGVDD INLFGQNLFE TWEEIQSENP KKKCNSFTPP  60
LTGMLLHAET MLKAAWKRHN SSSKRHTISK KGYRFHPTDE ELINYLKNFV LHGVLPPRDF  120
IKVADLFEDL EPWEIMAGSE EKTRYFLSRL KRFKNSTKKF SRTVGKGTWK GQNSGNPIED  180
GLKKNTTIGY KRSLKYKSDN EKDENNDKWL MKEYFLPDEY FRKSNKNYAF VICKIKEKKK  240
NEKKNKGVVN DDVMEEEVDE FIDYVLESIP DNHQVITNGD DNRFAVANEV NYEVMRTNYE  300
ASTSTLHEDY GGEGRSNYLE GGGVEDFNGI NHLLLGVEDI NDENCCIDYD ELLEIIG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39820.1	2e-17	NAC family protein