PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT96489.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 244aa MW: 28219.3 Da PI: 4.2856 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 27.4 | 9.5e-09 | 3 | 49 | 2 | 48 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiyk.vePwdLp 48 G+rFhPtdeel+ +yLk+ v + l+ ++i+ +d+ + +ePw++ PHT96489.1 3 SLGYRFHPTDEELI-NYLKNFVLHGVLPPRDFINVADLSEdLEPWEIM 49 57************.9**********999999****997626***985 PP | |||||||
2 | NAM | 22.7 | 2.7e-07 | 52 | 103 | 79 | 128 |
NAM 79 ksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +g+Wk + + +++ + k++++g k++L + + ++++ ++ +W+m+ey l PHT96489.1 52 GKGTWKGQNSGNPIEDGlkKNTTIGYKRSLKYKSDNEKDENNDKWLMKEYFL 103 68************987768888**********9999999**********76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MLSLGYRFHP TDEELINYLK NFVLHGVLPP RDFINVADLS EDLEPWEIMT VGKGTWKGQN 60 SGNPIEDGLK KNTTIGYKRS LKYKSDNEKD ENNDKWLMKE YFLPDEYFRK SNKNYAFVIC 120 KIKEKKKNEK KNKGVVNDDV MEEEVDEFID YVLESIPDNH QVITNGDDNR FAVENEVNYE 180 VMRTNYEAST STLHEDYGGE GRSNYLEGGG VEDFNGINHL LLGVEDINDE NCCIDYDELL 240 EIIG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G39820.1 | 2e-09 | NAC family protein |