PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMP11703
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family GATA
Protein Properties Length: 323aa    MW: 35434.1 Da    PI: 7.3111
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMP11703genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.18.8e-17216250135
      GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
               C +C + kTp+WR gp g+ktLCnaCG++y++ +l
  OMP11703 216 CLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRL 250
               99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MEAADFFVGG YYGGANGGDF SPEKRMMSGE QKLPESFTVD DLLDFSNEDA IINDGFFDNV  60
AGNSTDSSTV TCNSSVSGGN NYFSSANLPH SSQFSGELCV PYDDLAELEW LSNFVEDSFS  120
TEQNLQSNLP IFATSKSPTP ESSSSSTRPD SITRSPTNPI FQHDTPLPGK ARSKRSRAAP  180
CDWSTRLLHL TPKSSGQKKR ENPNPNANSE SSGRKCLHCA SEKTPQWRTG PMGPKTLCNA  240
CGVRYKSGRL VPEYRPAASP TFMSTKHSNS HRKVLELRRQ KELHRAQQQQ FLSQTSIFGI  300
SNGGGGDDFL IHHHGGPNFR HMI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.11e-77GATA family protein