PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMP11339 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | SBP | ||||||||
Protein Properties | Length: 183aa MW: 20486.9 Da PI: 9.1169 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 128 | 3.6e-40 | 61 | 138 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTS.SEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCs.rfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cq+++C+adls+ak+yh+rhkvC +hska+vvlv+g++qrfCqqCs rfh+l efDe+krsCrrrLa+hnerrrk++a OMP11339 61 CQADECNADLSDAKQYHKRHKVCAHHSKAQVVLVAGIRQRFCQQCSsRFHDLAEFDEAKRSCRRRLAGHNERRRKNSA 138 *********************************************55****************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
MGKVVKREAD NDEDEFELQF GGFTEDDDNK KRKNMNMIVG GSGRKGSIAT GGGAAGGLRY 60 CQADECNADL SDAKQYHKRH KVCAHHSKAQ VVLVAGIRQR FCQQCSSRFH DLAEFDEAKR 120 SCRRRLAGHN ERRRKNSAES HGDGSGQKGT EQLKDMICGQ VGDRGRMKLT IQENPTYKHF 180 QII |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G53160.1 | 2e-44 | SBP family protein |
Link Out ? help Back to Top | |
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Ensembl | OMP11339 |