PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO96713 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | GATA | ||||||||
Protein Properties | Length: 173aa MW: 18688.4 Da PI: 10.5816 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 61.7 | 9e-20 | 26 | 60 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+ C+ttkTplWR gp g+k+LCnaCG++yrkk++ OMO96713 26 CTDCKTTKTPLWRGGPAGPKSLCNACGIRYRKKRR 60 ********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence |
MGVMDLRERK SSLSGDVTMN ENKKFCTDCK TTKTPLWRGG PAGPKSLCNA CGIRYRKKRR 60 AILGLSKGSE KKKEKSNSSN NNNSSGSTTC SDSTMVTANE GEKKSSGQLN GLSEPVKLRI 120 FALGSEVLLQ RSSAEAALSG VVKKQRCQRR RKLGEEEQAA FSLMALSCGS VFA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06740.1 | 9e-23 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO96713 |