PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO95062 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 253aa MW: 29077.5 Da PI: 5.1866 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61.6 | 1.2e-19 | 34 | 88 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++++f++eq++ Le+ Fe++ ++ +++ +LA++lgL+ rqV +WFqNrRa++k OMO95062 34 KNKRRFSDEQIRLLESIFESETKLEPRKKLQLARELGLQPRQVAIWFQNRRARWK 88 56789*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 124.7 | 4.3e-40 | 35 | 126 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +krr+s+eq++lLE+ Fe+e+kLep++K +lareLglqprqva+WFqnrRAR+k+kq+E+dy++L+++yd+l+++ e+L++e+++L +l++ OMO95062 35 NKRRFSDEQIRLLESIFESETKLEPRKKLQLARELGLQPRQVAIWFQNRRARWKSKQIEQDYRTLRDNYDNLASKFESLKNEKQALMLQLQN 126 79************************************************************************************999876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MERGCVPGTE EAIIIAEELE ATQNQRKKKN YKMKNKRRFS DEQIRLLESI FESETKLEPR 60 KKLQLARELG LQPRQVAIWF QNRRARWKSK QIEQDYRTLR DNYDNLASKF ESLKNEKQAL 120 MLQLQNLSEL LAEPHEINDK GGKGVDGSSN GGGSEAEAEA EPPPKPSFQQ EGLMEDRGFL 180 GLQENDRKKI EHAGKQPAEE DYMGNESPAS PEKLYGFDSA AFRQGRSYLF GYIIEYFVDK 240 HSWEINGLAS SEE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 83 | 91 | RRARWKSKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46680.1 | 4e-40 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO95062 |