PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO95031
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family GRAS
Protein Properties Length: 555aa    MW: 62132.4 Da    PI: 4.5702
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO95031genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS447.31e-1361875553374
      GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIl 103
               + L++cA  +s+g+ e+a++++++l++++s +gdp qR+aay++e+Laar+a s++ lykal+++e +   ss++laa+++++ev+P++kf++++aN aI 
  OMO95031 187 QMLIDCAALLSEGNIEEASSIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKYLYKALRCKEPP---SSDRLAAMQILFEVCPCFKFGFMAANGAII 284
               79*****************************************************************9...9***************************** PP

      GRAS 104 eavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEal 202
               ea++ e+rvHiiDfdi+qG Q+++L+q++a+ p++pp lR+Tg+++pes+   +  le +g rL+k+Ae+lgvpfef++ va+r++ +++++L+++pgEal
  OMO95031 285 EAFKDEKRVHIIDFDINQGSQYITLIQTIAKLPGKPPYLRLTGIDDPESVqrLNGGLEIVGLRLEKLAEALGVPFEFEA-VASRTSLVRPSMLNIRPGEAL 384
               ************************************************99777889***********************.7******************** PP

      GRAS 203 aVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacega 303
               +Vn+++qlh+++desvs+ +erd++L++vksl+Pk+v+vveq++++n+++F+ rf+ea +yysa+fdsl+a+lpres++r++vE+++l+r+ivn+vaceg+
  OMO95031 385 IVNFAFQLHHMPDESVSTINERDQLLQMVKSLNPKLVTVVEQDVNTNTSPFFPRFIEAYSYYSAVFDSLDATLPRESQDRMNVEKQCLARDIVNIVACEGE 485
               ***************************************************************************************************** PP

      GRAS 304 errerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
               er+er e ++kWr+r+++aGF++ p+s+++ + ++ l++++ ++ y+++e+ g+l +gW+d++L+++SaWr
  OMO95031 486 ERIERYEVAGKWRARMTMAGFTACPMSSSVIDMIRKLIKEYCDR-YKLKEDLGALHFGWEDKSLIVASAWR 555
               ******************************************66.*************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 555 aa     Download sequence    
MSLVRSAEPS TAAYRNTKLY SLQGSSDTSD LSAQMFGSDK HRPVYITDSY SSESYEKYFL  60
DSPTEELIHP SSSGMSGSSL RLQDVSSYQL IDYLEIQSPD TLDSDTDQMK LKLQELERAL  120
LADNDVCEDD DMFGTGLSME IDNEWCDPVR TESLHDSPKE SSSSDSNLSS ISSNKEVSHV  180
SPRTPKQMLI DCAALLSEGN IEEASSIINE LRQMVSIQGD PPQRIAAYMV EGLAARMAAS  240
GKYLYKALRC KEPPSSDRLA AMQILFEVCP CFKFGFMAAN GAIIEAFKDE KRVHIIDFDI  300
NQGSQYITLI QTIAKLPGKP PYLRLTGIDD PESVQRLNGG LEIVGLRLEK LAEALGVPFE  360
FEAVASRTSL VRPSMLNIRP GEALIVNFAF QLHHMPDESV STINERDQLL QMVKSLNPKL  420
VTVVEQDVNT NTSPFFPRFI EAYSYYSAVF DSLDATLPRE SQDRMNVEKQ CLARDIVNIV  480
ACEGEERIER YEVAGKWRAR MTMAGFTACP MSSSVIDMIR KLIKEYCDRY KLKEDLGALH  540
FGWEDKSLIV ASAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.10.0GRAS family protein