PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO95031 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | GRAS | ||||||||
Protein Properties | Length: 555aa MW: 62132.4 Da PI: 4.5702 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 447.3 | 1e-136 | 187 | 555 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIl 103 + L++cA +s+g+ e+a++++++l++++s +gdp qR+aay++e+Laar+a s++ lykal+++e + ss++laa+++++ev+P++kf++++aN aI OMO95031 187 QMLIDCAALLSEGNIEEASSIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKYLYKALRCKEPP---SSDRLAAMQILFEVCPCFKFGFMAANGAII 284 79*****************************************************************9...9***************************** PP GRAS 104 eavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEal 202 ea++ e+rvHiiDfdi+qG Q+++L+q++a+ p++pp lR+Tg+++pes+ + le +g rL+k+Ae+lgvpfef++ va+r++ +++++L+++pgEal OMO95031 285 EAFKDEKRVHIIDFDINQGSQYITLIQTIAKLPGKPPYLRLTGIDDPESVqrLNGGLEIVGLRLEKLAEALGVPFEFEA-VASRTSLVRPSMLNIRPGEAL 384 ************************************************99777889***********************.7******************** PP GRAS 203 aVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacega 303 +Vn+++qlh+++desvs+ +erd++L++vksl+Pk+v+vveq++++n+++F+ rf+ea +yysa+fdsl+a+lpres++r++vE+++l+r+ivn+vaceg+ OMO95031 385 IVNFAFQLHHMPDESVSTINERDQLLQMVKSLNPKLVTVVEQDVNTNTSPFFPRFIEAYSYYSAVFDSLDATLPRESQDRMNVEKQCLARDIVNIVACEGE 485 ***************************************************************************************************** PP GRAS 304 errerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 er+er e ++kWr+r+++aGF++ p+s+++ + ++ l++++ ++ y+++e+ g+l +gW+d++L+++SaWr OMO95031 486 ERIERYEVAGKWRARMTMAGFTACPMSSSVIDMIRKLIKEYCDR-YKLKEDLGALHFGWEDKSLIVASAWR 555 ******************************************66.*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 555 aa Download sequence |
MSLVRSAEPS TAAYRNTKLY SLQGSSDTSD LSAQMFGSDK HRPVYITDSY SSESYEKYFL 60 DSPTEELIHP SSSGMSGSSL RLQDVSSYQL IDYLEIQSPD TLDSDTDQMK LKLQELERAL 120 LADNDVCEDD DMFGTGLSME IDNEWCDPVR TESLHDSPKE SSSSDSNLSS ISSNKEVSHV 180 SPRTPKQMLI DCAALLSEGN IEEASSIINE LRQMVSIQGD PPQRIAAYMV EGLAARMAAS 240 GKYLYKALRC KEPPSSDRLA AMQILFEVCP CFKFGFMAAN GAIIEAFKDE KRVHIIDFDI 300 NQGSQYITLI QTIAKLPGKP PYLRLTGIDD PESVQRLNGG LEIVGLRLEK LAEALGVPFE 360 FEAVASRTSL VRPSMLNIRP GEALIVNFAF QLHHMPDESV STINERDQLL QMVKSLNPKL 420 VTVVEQDVNT NTSPFFPRFI EAYSYYSAVF DSLDATLPRE SQDRMNVEKQ CLARDIVNIV 480 ACEGEERIER YEVAGKWRAR MTMAGFTACP MSSSVIDMIR KLIKEYCDRY KLKEDLGALH 540 FGWEDKSLIV ASAWR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21450.1 | 0.0 | GRAS family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO95031 |