PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO94698
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family ARF
Protein Properties Length: 851aa    MW: 94610 Da    PI: 6.6392
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO94698genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.89.7e-24160261199
               EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
               f+k+lt sd++++g +++ +++a+e+      + + + +++l+ +d++g++W++++i+r++++r++l++GW+ Fv++++L +gD ++F   + +++el+v+
  OMO94698 160 FCKTLTASDTSTHGGFSVLRRHADEClppldmSRQ-PPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGENGELRVG 257
               99*****************************7333.34459************************************************..449999**** PP

               EE-S CS
        B3  96 vfrk 99 
               v+r+
  OMO94698 258 VRRA 261
               *996 PP

2Auxin_resp117.61e-38286368183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 a+ha +t+++F+v+Y+Pr+s++eF+v++++++++lk+++s+GmRfkm+fe+e+++e+r++Gt+vg++d+dp rW++SkWr+Lk
    OMO94698 286 AWHAYTTRTIFTVYYKPRTSPAEFIVPFDQYVESLKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGMEDADPKRWKESKWRCLK 368
                 79*******************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 851 aa     Download sequence    
MTTSEVSTKG NCVNGRGESF SSGYSEPNDA RNTMEGQNGH STRPAAARDA ETALYTELWH  60
ACAGPLVTVP REGERVFYFP QGHIEQVEAS TNQVADQQMP VYNLPSKILC RVINVQLKAE  120
PDTDEVFAQV TLLPEPTQDE NTVDKEPPIP PPPRFHVHSF CKTLTASDTS THGGFSVLRR  180
HADECLPPLD MSRQPPTQEL VAKDLHGNEW RFRHIFRGQP RRHLLQSGWS VFVSSKRLVA  240
GDAFIFLRGE NGELRVGVRR AMRQQGNVPS SVISSHSMHL GVLATAWHAY TTRTIFTVYY  300
KPRTSPAEFI VPFDQYVESL KNNYSIGMRF KMRFEGEEAP EQRFTGTIVG MEDADPKRWK  360
ESKWRCLKVR WDDTSTIPRP ERVSPWKIEP ALAPPALNPL PMPRPKRPRS NAVPSSPDSS  420
VLTREGSSKV TVDPSPGSGF SRVLQGQEFS TLRGNFAESN ESDTAEKSVI WPPSVDDEKI  480
DVASASRRFG SENWMPSGRH EPTYTDLLSG FGSNADSNHG YCQPLGDQTL SAGNPVRKQF  540
LDQEGKLGTW SLMPSGLSLK LSDTNGKPPM QGSDNPYQAR GNGRFSGFGE YPILQGHRIE  600
HSHVNWLMPP PASPHFEQPA HSRELIPKTS LQEHEAGKSR EGNCKLFGIP LFSNPVTSES  660
AVSHPNALSK PVGHMQPASH QVCVFESDQK SEKPKVAEDL SAFNEQDKAL VQPHTREIQN  720
KPSSVSTRSC TKVHKQGIAL GRSVDLTKFN NYDELIAELD QLFEFGGELV ASKKNWLVVY  780
TDDEGDMMLV GDDPWQEFCA MVRKIGIYTR EEVQKMKPGS LNSKGEENPV SAEGMDAKEV  840
KCPSAFSSET C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein