PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO92104

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

Dof

Protein Properties

Length: 312aa MW: 34467.5 Da PI: 7.2231

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO92104	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.8	3.1e-40	51	111	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++alkcprCdst+tkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGgg+rknkk+ OMO92104 51 HDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVA 111 6899******************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
MGLTSLQVCM DSSDWLQGTI HEESGMDSSS PSGDMLTCSR PLIERRLRPP HDQALKCPRC 60 DSTHTKFCYY NNYSLSQPRY FCKTCRRYWT KGGTLRNIPV GGGCRKNKKV ASKKSSNDHS 120 PNNLTAAASS HHNHNPTDLH LSFPHEMHLS HHLNNILATH GTTNTANFME SKYNSLFENP 180 TRPIDFMESK LEAIVGSSRI NNYDFMGNNN GDLGMVGGLT GEMGHMGLCS APYGGMSQLD 240 GNGTGTSFML PYEDQHAVVE VKPNTKLLSL EWQQDQGCSD AGKDHTYGYM SNLGSWTGMI 300 NNYGPSTTNP LV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62940.1	2e-57	Dof family protein

Link Out ? help Back to Top
Ensembl	OMO92104