PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO87676 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | Dof | ||||||||
Protein Properties | Length: 242aa MW: 24720.4 Da PI: 8.2627 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 120.9 | 4.5e-38 | 27 | 85 | 4 | 62 |
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 + l+cprCdst tkfCyynny+l+qPryfCk+CrryWt+GG+lrnvPvGgg+rk k+s OMO87676 27 DPLPCPRCDSTSTKFCYYNNYNLAQPRYFCKSCRRYWTQGGTLRNVPVGGGTRKASKRS 85 6789**************************************************88765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MAADSGDRRP ARVPGNMASH PPPKLTDPLP CPRCDSTSTK FCYYNNYNLA QPRYFCKSCR 60 RYWTQGGTLR NVPVGGGTRK ASKRSRSSSV SSPSVATSSS SSVTNEAESM PLPTNPVSAM 120 PAPGVKPEMG MADVNLNEAV DLPVNGSFTS FLSSHGEGYL TLGGYGFGAA SGFDGVWGYP 180 GNGYLGGFSG GGGGGAGGAV GGATGCNTWQ PTSDVENGPG LVDGDCFGWP SLAISAPGKG 240 LK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G47655.1 | 1e-27 | Dof family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO87676 |