PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO87520 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | TALE | ||||||||
Protein Properties | Length: 686aa MW: 75620.9 Da PI: 6.4069 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 28.6 | 2.4e-09 | 432 | 469 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LAk++gL+ +qV +WF N R + OMO87520 432 FEHflHPYPKDSEKIMLAKQTGLSRNQVANWFINARVR 469 664459******************************88 PP | |||||||
2 | BELL | 130.6 | 5.2e-42 | 295 | 366 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqelq+kk+kLls+l+eVd+rY+qy++q+++v+ssF++vag g+akpYt+lAl++iSrhFrcL+dai++qi OMO87520 295 ERQELQNKKTKLLSMLDEVDRRYRQYYHQMKIVVSSFDMVAGSGAAKPYTALALQTISRHFRCLRDAISGQI 366 79*********************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 686 aa Download sequence |
MATYYPNFSY QRDNLSTTYL GDQKPVSYLE SPSDPGNSPI YLNQASTTGA FSEILSGSSL 60 SLQNCVQIPS IGGRNEMSFI PPSTEAVSLQ SVDGQLNITS STSICNSVAA PVLPRSVLDG 120 EQSSQSQGLS LSLGSQSQIS SGVPVPSLHY QYQGYSSLFS GHLPFSGKGT IPFTGDESKR 180 SKELKISDGM NCGYTGGNND AFEIDALSNP QGSINQKQMH SEIYQFESGF STTILNSRYL 240 RVAQELLDEV VNVRKALKQP DTDKNASSQL KSSNGMSSEP SESVNNSSSD ISPAERQELQ 300 NKKTKLLSML DEVDRRYRQY YHQMKIVVSS FDMVAGSGAA KPYTALALQT ISRHFRCLRD 360 AISGQIQQTQ KSLGEQENSS NNQGGVIPRL RYVDHQLRQQ RALQQLGVMR NAWRPQRGLP 420 ESSVSILRAW LFEHFLHPYP KDSEKIMLAK QTGLSRNQVA NWFINARVRL WKPMIEEMYK 480 EEFGEMDSNF KTSLENAAKA ARENSATSED KGEEFQESMT SKTADADNVQ PGQVQYLKPD 540 HITDVELNRP TARSMFQSFA TGDAGSPSGT KLQFNQRSNV EGNNPYSNTI IPASQHGHGS 600 LMTGDAMYDL TELSNFAVGG QVSLALGLRH HENNVFPMSG DTNMRGSNKV ASSVGPETVD 660 FHCMDPGNEQ DRSRKKKRVT EPEGDK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16400.1 | 1e-110 | TALE family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO87520 |