PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO87505 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | ERF | ||||||||
Protein Properties | Length: 252aa MW: 27515.4 Da PI: 6.5974 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.3 | 4.5e-19 | 42 | 91 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ykGVr++ +g+WvAeIr+p + r +r +lg+f+t eAa a++aa++kl+g OMO87505 42 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFDTSHEAAMAYDAAARKLYG 91 69****999.**********8...3.35************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MSTSVMGNSS YGEKKPMKKP AQASSRKGCM RGKGGPENAM CTYKGVRQRT WGKWVAEIRE 60 PNRGARLWLG TFDTSHEAAM AYDAAARKLY GSEAKLNLPE LCATGGSQYH HHHHPAANSN 120 VAPIGNNVNQ LHHHQNVNNT NSGTSSSNST TSMMRATNDV TSVYNDVSSS VMSSFPNENM 180 NNSQGNLVEN NGKYDEGFWE NMSVNLPVLD ESIWAEAAMS LDFPVMDIEP GSFGSTLVDT 240 TGWDALQSPW CM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75490.1 | 4e-49 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO87505 |