PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO86724
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family GRAS
Protein Properties Length: 365aa    MW: 42681 Da    PI: 7.5424
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO86724genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS851.3e-26103342345
      GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf..shltaNq 100
               ++lLlecA a+++g+lel++alL+r+ +la ++ +   R+++y++eAL +r ++        l+ps             l +f+ + P++ +    l+ N 
  OMO86724  10 KKLLLECAGAFEDGNLELVDALLERIWTLAPKSYR--GRVVKYYAEALVRRAYG--------LHPS-------------LAYFYSLLPCYFLydESLLYNY 87 
               589**************************987765..6***************9........3333.............3469999998877334688999 PP

      GRAS 101 aIlea.vege..ervHiiDfdisqGlQWp..aLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeelgvpfe.fnvlvakrledlele. 192
                I    ++g+  ++vH iDf + +  +     L++ + +    + +  +R+ +v +p  +    + + ++ La+ Aee++++f+  ++++a++l +++++ 
  OMO86724  88 EIKAKvFKGKkqKQVHLIDFYLPHLYHRNrgYLFDGMRKLVcgDTTVCVRVSVVLPPFLKGIVDVGREEQYLARQAEEMEIEFKnLQMVYANSLGEMNPKl 188
               99755156656699******9988766542258777776665355669********999999999999***************8467779999*9998763 PP

      GRAS 193 ..eLrvkp......gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                 +L++        +Eal++  + +l +ll+e+++le      Lk + +++P+vv ++e +a+hn+++F +r+ +++ +y     +++++           
  OMO86724 189 pfMLNLLGrraeddDEALVIFYSSKLNKLLAEEGALER----ELKRLAQINPDVVFITEPNANHNQSNFIQRLDHSFPFYFPRWSCFDEQ----------- 274
               33453322334567**********************99....9*************************************9999999888........... PP

      GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFk.pvplsekaakqaklllrkvk 345
               Er   + ei n+v ce ++r+ rh +le+Wr+ + +aGF  p+pl+++ +kq k  l  + 
  OMO86724 275 ERI-RRGEIGNIVGCESKDRVVRHLSLEQWRSLFLSAGFMiPIPLQSQYYKQEKGCLVDYR 334
               333.5679*******************************769**********999888776 PP

Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
MDDFDGSKSK KLLLECAGAF EDGNLELVDA LLERIWTLAP KSYRGRVVKY YAEALVRRAY  60
GLHPSLAYFY SLLPCYFLYD ESLLYNYEIK AKVFKGKKQK QVHLIDFYLP HLYHRNRGYL  120
FDGMRKLVCG DTTVCVRVSV VLPPFLKGIV DVGREEQYLA RQAEEMEIEF KNLQMVYANS  180
LGEMNPKLPF MLNLLGRRAE DDDEALVIFY SSKLNKLLAE EGALERELKR LAQINPDVVF  240
ITEPNANHNQ SNFIQRLDHS FPFYFPRWSC FDEQERIRRG EIGNIVGCES KDRVVRHLSL  300
EQWRSLFLSA GFMIPIPLQS QYYKQEKGCL VDYRDHFHSA WKFNPVDHFN PTSFNSLLRV  360
NYATQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17490.12e-21GRAS family protein