PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO86696 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | NAC | ||||||||
Protein Properties | Length: 275aa MW: 31355.9 Da PI: 5.1234 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 50.8 | 5.3e-16 | 7 | 163 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkya.......tgkrknra................. 77 pGfrF+Pt e ++++yL+ ++g++l+ ++++e+d+y ePw+L + ++++ w f + + k+ + t + OMO86696 7 RPGFRFSPTGEVVLQCYLRDAINGQNLPS-DIFTEADLYGDkEPWKLFN-PNHSHPYWVFTHLKMKRDSvsvakqtT------Tkkkgkgnskakknreee 99 79**************************9.99******97549****53.233334454444444433333321110......011233444444444556 PP NAM 78 .......tksgyWkatgkdkevlskkgelvglkktLvfy.......kgrapkgektdWvmheyrl 128 + g Wk + + s +ge+ g + f +g++p+ ++ +W+mhe+++ OMO86696 100 eekhdrtAGGGSWKGRSVHDILSSDDGEKLGFDREYKFKlnhddegRGSNPN-SNGNWIMHEFSI 163 66555548899***98887666666999999999999997777755556666.699*******86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence |
MPLQSLRPGF RFSPTGEVVL QCYLRDAING QNLPSDIFTE ADLYGDKEPW KLFNPNHSHP 60 YWVFTHLKMK RDSVSVAKQT TTKKKGKGNS KAKKNREEEE EKHDRTAGGG SWKGRSVHDI 120 LSSDDGEKLG FDREYKFKLN HDDEGRGSNP NSNGNWIMHE FSIKGCDLVI CEIKNLKRKR 180 KVCAVTEEQA GLVDTPLPDD DDDFLKKLDV GDRDHQLQVC PIPEEQSGLV DAPVPDDDDD 240 FVNSLLNSEW DWNFIASDRE FSSPLQQQQH IPLVF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G17730.1 | 2e-08 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO86696 |