PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO85412 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | SBP | ||||||||
Protein Properties | Length: 69aa MW: 7953.08 Da PI: 10.2779 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 54 | 4.5e-17 | 23 | 69 | 2 | 47 |
-SST.T-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTS CS SBP 2 Cqve.gCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCs 47 C v+ g ++d+ + ++yh rh+vC++hsk p v+v+g+e rfCqqCs OMO85412 23 CLVDdGYKSDFGKFRKYHMRHRVCKHHSKDPLVIVEGKELRFCQQCS 69 777525789*************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 69 aa Download sequence |
SSGSGSFKRS NSLSSRNQKL MSCLVDDGYK SDFGKFRKYH MRHRVCKHHS KDPLVIVEGK 60 ELRFCQQCS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50670.1 | 1e-14 | SBP family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO85412 |