PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO85251 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | GATA | ||||||||
Protein Properties | Length: 355aa MW: 39456.7 Da PI: 4.6841 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 45.8 | 8.4e-15 | 191 | 227 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C+nCg ++ Tp +R+gp g++tLCnaCGl+++ kg+ OMO85251 191 CHNCGISEnlTPAMRKGPAGPRTLCNACGLMWANKGT 227 **********************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 355 aa Download sequence |
MDGVNKRGLL TRPYVYEHDN GGFEGEEFNG ARQVVMNGMM SSVSHANGVG GGGLVQATRT 60 SELTIAFEGE VYVFPAVTSD KVKAVLLLLG GRDASTNVPS SEFLLQEKFK VVGDSSRGSK 120 LSRRIASLVR FREKKKDRCY EKKIRYTCRK EVAQRMHRKN GQFASLKECD NLADGSWDQS 180 DAAPESALRR CHNCGISENL TPAMRKGPAG PRTLCNACGL MWANKGTLRD LRKGGRDAHF 240 DSNEPETPTD IKPSTMEPEN SFANGDEQES PEETKPLPLD SEDHLIRSDE QEFIENSHAF 300 PIQVENSSVN LDDEDLQETL EELADTSGSD FEIPTHFDEQ VDIDDTNMGM EWPRT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21175.1 | 5e-55 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO85251 |