PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO85251
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family GATA
Protein Properties Length: 355aa    MW: 39456.7 Da    PI: 4.6841
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO85251genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA45.88.4e-15191227135
      GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
               C+nCg ++  Tp +R+gp g++tLCnaCGl+++ kg+
  OMO85251 191 CHNCGISEnlTPAMRKGPAGPRTLCNACGLMWANKGT 227
               **********************************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MDGVNKRGLL TRPYVYEHDN GGFEGEEFNG ARQVVMNGMM SSVSHANGVG GGGLVQATRT  60
SELTIAFEGE VYVFPAVTSD KVKAVLLLLG GRDASTNVPS SEFLLQEKFK VVGDSSRGSK  120
LSRRIASLVR FREKKKDRCY EKKIRYTCRK EVAQRMHRKN GQFASLKECD NLADGSWDQS  180
DAAPESALRR CHNCGISENL TPAMRKGPAG PRTLCNACGL MWANKGTLRD LRKGGRDAHF  240
DSNEPETPTD IKPSTMEPEN SFANGDEQES PEETKPLPLD SEDHLIRSDE QEFIENSHAF  300
PIQVENSSVN LDDEDLQETL EELADTSGSD FEIPTHFDEQ VDIDDTNMGM EWPRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.15e-55GATA family protein