PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO84725 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | WOX | ||||||||
Protein Properties | Length: 193aa MW: 21628.4 Da PI: 7.0434 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 51.8 | 1.4e-16 | 97 | 156 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 + +t+t+ ql++L lF + ps+++++e++++l +++e+++++WFqNrRa+ k+ OMO84725 97 QQWTPTPVQLQILVGLFDQgIGIPSKQKIKEITSELsqhgQISETNIYNWFQNRRARSKR 156 579***************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 92.2 | 4.8e-30 | 95 | 158 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 a++ WtPtp Q++iL l+++G+ P+k++i++it+eL+++G+i+++N+++WFQNr+aR+++kq OMO84725 95 ATQQWTPTPVQLQILVGLFDQGIGIPSKQKIKEITSELSQHGQISETNIYNWFQNRRARSKRKQ 158 6789**********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MASRPRFPLV EIDLNSFQRD EEQIVKEHPR LPDLNTNVEE DVFELNFPLA DRPSPTQPLI 60 DLNEGPPKHA NSSGGRLRNL YCDPLMTSTG HKITATQQWT PTPVQLQILV GLFDQGIGIP 120 SKQKIKEITS ELSQHGQISE TNIYNWFQNR RARSKRKQLA ASSNNADNPG LDLHPCPALP 180 VTTAYVCPSA RIN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 150 | 158 | RRARSKRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35550.1 | 2e-45 | WOX family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO84725 |