PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO84725
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family WOX
Protein Properties Length: 193aa    MW: 21628.4 Da    PI: 7.0434
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO84725genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox51.81.4e-1697156357
               --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
  Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
               + +t+t+ ql++L  lF +    ps+++++e++++l    +++e+++++WFqNrRa+ k+
  OMO84725  97 QQWTPTPVQLQILVGLFDQgIGIPSKQKIKEITSELsqhgQISETNIYNWFQNRRARSKR 156
               579***************99**************************************97 PP

2Wus_type_Homeobox92.24.8e-3095158265
  Wus_type_Homeobox   2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        a++ WtPtp Q++iL  l+++G+  P+k++i++it+eL+++G+i+++N+++WFQNr+aR+++kq
           OMO84725  95 ATQQWTPTPVQLQILVGLFDQGIGIPSKQKIKEITSELSQHGQISETNIYNWFQNRRARSKRKQ 158
                        6789**********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MASRPRFPLV EIDLNSFQRD EEQIVKEHPR LPDLNTNVEE DVFELNFPLA DRPSPTQPLI  60
DLNEGPPKHA NSSGGRLRNL YCDPLMTSTG HKITATQQWT PTPVQLQILV GLFDQGIGIP  120
SKQKIKEITS ELSQHGQISE TNIYNWFQNR RARSKRKQLA ASSNNADNPG LDLHPCPALP  180
VTTAYVCPSA RIN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1150158RRARSKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.12e-45WOX family protein