PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO84526 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | ZF-HD | ||||||||
Protein Properties | Length: 106aa MW: 12205.4 Da PI: 4.4533 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 77.3 | 2e-24 | 20 | 74 | 4 | 59 |
ZF-HD_dimer 4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 + Yk+C++NhA +lG vDGC Ef p+++ + l+C ACgCHR+FHR+ev e OMO84526 20 TIYKDCMRNHASHLGLDIVDGCFEFAPKRNG-HADDELNCEACGCHRSFHRKEVME 74 68*************************9444.57899***************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 106 aa Download sequence |
MANNQRKPFE LIERETRTVT IYKDCMRNHA SHLGLDIVDG CFEFAPKRNG HADDELNCEA 60 CGCHRSFHRK EVMEKQIPLE SSDDEDEQGL GEVEDLDDDE VNKPKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02540.1 | 4e-15 | ZF-HD family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO84526 |