PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO84387 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | GeBP | ||||||||
Protein Properties | Length: 227aa MW: 25606.5 Da PI: 10.4842 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 64.9 | 1.9e-20 | 12 | 103 | 2 | 98 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 +f+r++se+Dei +L+ li+ +++ + + ++++ + ++++ k+++sq+ Kir+LK K++k+ k + ++++hd+k+f+lsk+iWg+ OMO84387 12 QFSRVFSESDEIQILKSLIKATKSLPSPITTIAAEIVDRIAERLNYKFTSSQINGKIRKLKTKYHKHAKS-----KSLVRTHHDRKVFKLSKRIWGK 103 699*****************9777775555577889*******************************999.....6678999*************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
METPPPRSPN GQFSRVFSES DEIQILKSLI KATKSLPSPI TTIAAEIVDR IAERLNYKFT 60 SSQINGKIRK LKTKYHKHAK SKSLVRTHHD RKVFKLSKRI WGKKTAPKKK NETQGGEIGN 120 GKADDDGVGN LGKFPVAAQN EESRVVDGVG NLEKFPYLVA EFSRVLPENE VWKERMNGFD 180 EKKLRKMDQE WVALKVEEAK LVAKKAELMQ QQIMMIMGEA GSTNGLN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61730.1 | 5e-09 | GeBP family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO84387 |