PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO81688 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | bHLH | ||||||||
Protein Properties | Length: 236aa MW: 26822.8 Da PI: 8.0725 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43.5 | 5.8e-14 | 66 | 118 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+ +hn+ Er RR+++Ns ++ Lr llP a a+ kKls ++ ++ +YI +Lq OMO81688 66 RKLNHNASERDRRRKVNSLYSSLRALLPAA--AQMKKLSFPATISHTLKYIPELQ 118 6889*************************6..5*******************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MCALAPYPIP SWPLVNPIGC YEQKYMYEGS ESIESLFLQL PPSQEEIHQV DDQSPSFNSC 60 DPGRVRKLNH NASERDRRRK VNSLYSSLRA LLPAAAQMKK LSFPATISHT LKYIPELQEE 120 VERLVEKKEK LLQRISQQGG LKLEEQKRKS RNGRNLGAAV SIEGLSESEV AIHITMAKAH 180 KKSDQLSEIL QYLEQDGMFL LLNATSFESF GGMVFYNIHL QVSSLFNYSM IKSLLM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56980.1 | 4e-36 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO81688 |