PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO81675 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | bHLH | ||||||||
Protein Properties | Length: 59aa MW: 6931.01 Da PI: 10.5554 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.7 | 6.5e-11 | 3 | 32 | 1 | 30 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 1 rrrahnerErrRRdriNsafeeLrellPka 30 ++ +hn+ Er RR+++N+ ++ Lr+llP a OMO81675 3 KKLNHNASERDRRRKVNNLYSSLRSLLPAA 32 6789************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 59 aa Download sequence |
MVKKLNHNAS ERDRRRKVNN LYSSLRSLLP AAAQLMVERI SNYNVESEVL REKLLSLFE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56980.1 | 2e-14 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO81675 |