PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OMO80466 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
|
||||||||
Family | NZZ/SPL | ||||||||
Protein Properties | Length: 306aa MW: 32818 Da PI: 10.0589 | ||||||||
Description | NZZ/SPL family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NOZZLE | 45 | 2.8e-14 | 33 | 303 | 39 | 314 |
NOZZLE 39 tkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkklvvatvgdtssvaaisntatrlpvpvdrgvvlqgfpsslgssrilcggvgsgqvmidpv 139 k s+g+k k qkqkkp rgmgva+ler +i+e kk++ +tv + + t vpv +gv + + +++ ++ gg g OMO80466 33 VKSSKGKKASGK--GQKQKKPPQRGMGVAQLERLRIQERWKKMTGTTVQFPPDPVKVKGK-TSNIVPVLQGVGVANYAAAVNPM-MINGGNGG-------- 121 566888887776..4899*************************99998766644444443.33345799999999998887654.44455543........ PP NOZZLE 140 ispwgfvetsatthelssisnpqmynassnnrcdtcfkkkrldgdqnnvvrsngggfskytmipppmngydeyl....lqsd.....hhqrsqgflydqri 231 wg+ ++ +t l i+ ++ n + f+k r g++ n ggf k+ + p++g ey+ l+++ ++ +gf ++ OMO80466 122 --LWGWGCSTDSTAGLVNIPRVNVGNGGFGG-FNGGFQKMRYKGENVN----FDGGFNKFGQVL-PIKGSTEYVhgfnLENNqniikEEMNNNGFTPTPKV 214 ..3555444445799*********9999887.899*********9933....4789****9985.456666654221133321111123567899999999 PP NOZZLE 232 araasvsaasasinp.yfneatnltgsreefgsvlegnprngsrgvkeyeffpgkydervskv......akvaslvgdcspn.......tidlslkl 314 r+a +aa a n +nea + + + +gn v eye+fpgk +s a+++ +vgd +dlslkl OMO80466 215 VRTA--AAAYAGQNQiDINEAVEVSVIHR------KGNTMGNGSVVMEYELFPGKSSRSTSSKewerlpAQASVAVGDDHEAsyvnpsnGVDLSLKL 303 9999..56666655415888887665333......344444445799********876554321222226778888985322222333489999987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 306 aa Download sequence |
MATPFTLLSP NTNNPASRSL EDDEAAKAGM EFVKSSKGKK ASGKGQKQKK PPQRGMGVAQ 60 LERLRIQERW KKMTGTTVQF PPDPVKVKGK TSNIVPVLQG VGVANYAAAV NPMMINGGNG 120 GLWGWGCSTD STAGLVNIPR VNVGNGGFGG FNGGFQKMRY KGENVNFDGG FNKFGQVLPI 180 KGSTEYVHGF NLENNQNIIK EEMNNNGFTP TPKVVRTAAA AYAGQNQIDI NEAVEVSVIH 240 RKGNTMGNGS VVMEYELFPG KSSRSTSSKE WERLPAQASV AVGDDHEASY VNPSNGVDLS 300 LKLSYN |
Link Out ? help Back to Top | |
---|---|
Ensembl | OMO80466 |