PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO79859

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

Dof

Protein Properties

Length: 275aa MW: 30421.9 Da PI: 8.57

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO79859	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.2	1e-39	36	96	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ke+al+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrn+PvGgg+rknk+ss OMO79859 36 KEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSS 96 7899******************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence
MDTAQWPQEI VVKPIEEIVV TNTCPKPTER KTRPQKEQAL NCPRCNSTNT KFCYYNNYSL 60 TQPRYFCKTC RRYWTEGGSL RNIPVGGGSR KNKRSSVSSS TSSIKKLPDL VTPQNPKIHD 120 GQDLNLAFPA SQGFRNIPEL VQVPNNENNN KNNNQIPSSS STSPTTSQHL SALELLTGIS 180 SRGLNSFIPM PVTDPYTSGF PMQEFKPSLN FTLDGLGSGY GSLHGVQETT GGRLLFPFED 240 LKQVSSTNDI DHHQQNKEQG DSAGYWTGML GGGSW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24060.1	4e-52	Dof family protein

Link Out ? help Back to Top
Ensembl	OMO79859