PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO79280 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | ZF-HD | ||||||||
Protein Properties | Length: 103aa MW: 11521 Da PI: 8.3887 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 105.7 | 2.8e-33 | 26 | 82 | 3 | 60 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 +vrY eC+kNhAa +Gg+avDGC+Efm+s geegt+aal+CaACgCHRnFHRreve+e OMO79280 26 SVRYGECQKNHAAGVGGYAVDGCREFMAS-GEEGTSAALTCAACGCHRNFHRREVETE 82 69**************************9.999*********************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 103 aa Download sequence |
MRKRQVVLRR EEPSRSTTNS SLTIRSVRYG ECQKNHAAGV GGYAVDGCRE FMASGEEGTS 60 AALTCAACGC HRNFHRREVE TEVVCILDPL PLHGFQPRHA YIW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28917.1 | 6e-43 | ZF-HD family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO79280 |